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Automated Colony Counting & Detection

The best-in-class solution for colony counting that actually works.

The best-in-class solution for colony counting that actually works.

Reliable QC at Scale

What we discuss:

‍

  • The workflow and value of Reshape’s automated colony counting solution for QC microbiology teams
  • The value of automating a widely-used QC technique for tracking microbial growth and contamination across products
  • The importance of making data fully traceable and providing more confidence in QC results
  • A description of how we train, deploy and validate our AI models (with data)
Download application note

Flexible R&D workflows

What we discuss:

‍

  • The workflow and value of Reshape’s automated colony counting solution for R&D microbiology teams
  • The value of automating assays to improve documentation and traceability across experiments
  • Explore the flexibility in colony counting methods, techniques and throughput of Reshape's platform
  • A description of how we train, deploy and validate our AI models (with data)
Download application note

OD Turbidity

An alternative solution for measuring OD turbidity whereby AI is used to track HSV color changes in images and translate them into quantitative turbidity values.

An alternative solution for measuring OD turbidity whereby AI is used to track HSV color changes in images and translate them into quantitative turbidity values.

Discover a new and high throughput way to measure turbidity.

What we discuss:

‍

  • The validity of using Reshape's platform and high-resolution imaging as a replacement for traditional laser-point OD readings
  • The value of visual monitoring for aggregating-type bacteria
  • Compares the growth of S.aureus and E.coli in the Reshape platform and a plate reader (with data)
Download application note

Halo & Zones of Inhibition

Review how Reshape uses automated imaging and AI to detect and measure halo zones.

Review how Reshape uses automated imaging and AI to detect and measure halo zones.

Capture and quantify inhibition zones at the right moment.

What we discuss:

‍

  • The validity of using Reshape's automation platform and high-resolution imaging as a reliable and reproducible method for measuring zones of inhibition
  • How time-lapse capture accurately measures halo zones at critical, hard-to-observe stages
  • Discover how Reshape measures assays such as antibiotic disk diffusion and proteolytic activity (with data)
Download application note

Radial Growth Rates

Reshape modernizes radial growth rate measurements by fully automating incubation, imaging, and data analysis in a single integrated platform.

Reshape modernizes radial growth rate measurements by fully automating incubation, imaging, and data analysis in a single integrated platform.

Highly accurate and time-resolved radial growth assays.

What we discuss:

‍

  • The validity of using Reshape's automation platform and high-resolution imaging as a reliable tool for measuring radial growth rates
  • High-res imaging and capture rate/timelapse
  • Build library and database
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Antagonism

Learn how Reshape can help transform a qualitative antagonism assay into a scalable, data-driven workflow.

Learn how Reshape can help transform a qualitative antagonism assay into a scalable, data-driven workflow.

Easily observe and analyze competition dynamics between microbes on solid media.

What we discuss:

‍

  • The importance of improving traditional dual-culture assays, which are typically evaluated through manual inspection, or endpoint inhibition zone measurements that lack temporal resolution and reproducibility
  • The critical need for time-resolved, objective quantification of microbial interactions
  • How this transforms qualitative assays into scalable, data-driven screening workflows
Download application note

Digitized Seed Scoring

Reshape's system captures standardized images under controlled conditions and applies analysis models to quantify germination, growth, and phenotypic traits objectively and reproducibly.

Reshape's system captures standardized images under controlled conditions and applies analysis models to quantify germination, growth, and phenotypic traits objectively and reproducibly.

Generate instant and reliable seed scoring with AI-powered high-resolution imaging.

What we discuss:

‍

  • The limitations of traditional manual seed assays for germination, health scoring, and varietal tracking, which are time-consuming, subjective, and prone to operator variability
  • Manual or semi-automated approaches struggle with bias, inconsistent lighting, reflections, and limited temporal resolution, creating bottlenecks and compromising data quality
  • How the Reshape Smart Incubator enables standardized, AI-driven seed analysis and how this transforms seed assays into scalable, time-resolved workflows
Download application note

Automated Colony Differentiation

Reshape combines automated imaging with configurable colony classification models.

Reshape combines automated imaging with configurable colony classification models.

Detect different colonies and microbial phenotypes on a single plate.

What we discuss:

‍

  • The limitations of traditional total plate counts, which only report overall CFU and fail to distinguish between different colony types in mixed cultures, co-culture experiments, or contamination scenarios
  • How the platform automatically detects, segments, classifies, and quantifies colonies based on morphology, color, size, and timing, eliminating manual tracing and subjective interpretation
  • See colony counting application notes for full overview of Reshape’s capabilities
Download application note

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